How to use the sqlitedict.SqliteDict function in sqlitedict

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github OpenMDAO / OpenMDAO1 / mpitest / test_sqlite.py View on Github external
def assertIterationDataRecorded(self, expected, tolerance, root):
        if self.comm.rank != 0:
            return

        db = SqliteDict(self.filename, self.tablename_iterations)
        _assertIterationDataRecorded(self, db, expected, tolerance)
        db.close()
github RaRe-Technologies / gensim / gensim / similarities / simserver.py View on Github external
if save_index:
            if self.fresh_index is not None:
                self.fresh_index.save(self.location('index_fresh'))
            if self.opt_index is not None:
                self.opt_index.save(self.location('index_opt'))
        if save_model:
            if self.model is not None:
                self.model.save(self.location('model'))
        self.payload.commit()
        if clear_buffer:
            if hasattr(self, 'fresh_docs'):
                try:
                    self.fresh_docs.terminate() # erase all buffered documents + file on disk
                except:
                    pass
            self.fresh_docs = SqliteDict() # buffer defaults to a random location in temp
        self.fresh_docs.sync()
github mdolab / OpenAeroStruct / assignment / OptView.py View on Github external
histIndex = ''
            else:
                histIndex = '_' + chr(histIndex + ord('A'))

            if histFileName == 'as':
                histFileName = 'aerostruct.db'
            elif histFileName == 'a':
                histFileName = 'vlm.db'
            elif histFileName == 's':
                histFileName = 'spatialbeam.db'

            try:
                db = shelve.open(histFileName, 'r')
                OpenMDAO = False
            except: # bare except because error is not in standard Python
                db = SqliteDict(histFileName, 'iterations')
                OpenMDAO = True
                if db.keys() == []:
                    OpenMDAO = False
                    db = SqliteDict(histFileName)

            if OpenMDAO:
                string = db.keys()[-1].split('|')
                if string[-1]=='derivs':
                    nkey = int(string[-2]) + 1 # OpenMDAO uses 1-indexing
                else:
                    nkey = int(string[-1]) + 1 # OpenMDAO uses 1-indexing
                solver_name = string[0]
            else:
                nkey = int(db['last'])
            self.iter_type = np.zeros(nkey)
github mdolab / OpenAeroStruct / assignment / OptView.py View on Github external
else:
                    nkey = int(string[-1]) + 1 # OpenMDAO uses 1-indexing
                solver_name = string[0]
            else:
                nkey = int(db['last'])
            self.iter_type = np.zeros(nkey)

            # Check to see if there is bounds information in the hst file
            try:
                self.bounds = dict(
                    db['varBounds'].items() + db['conBounds'].items())
            except KeyError:
                pass

            if OpenMDAO:
                deriv_keys = SqliteDict(histFileName, 'derivs').keys()
                deriv_keys = [int(key.split('|')[-1]) for key in deriv_keys]

            for i in xrange(nkey):
                if OpenMDAO:
                    key = '{}|{}'.format(solver_name, i)

                    try:
                        f = db[key]['Unknowns']
                        if i in deriv_keys:
                            self.iter_type[i] = 1 # for 'major' iterations
                        else:
                            self.iter_type[i] = 2 # for 'minor' iterations

                        for key in sorted(f):
                            new_key = key + '{}'.format(histIndex)
                            if new_key not in self.func_data_all:
github mdolab / OpenAeroStruct / visualizations / view_geometry.py View on Github external
def load_db(self):
        self.db = sqlitedict.SqliteDict(self.db_name, 'iterations')

        self.twist = []
        self.mesh = []
        self.def_mesh = []
        self.radius = []
        self.thickness = []
        sec_forces = []
        normals = []
        widths = []
        self.lift = []
        self.lift_ell = []
        self.vonmises = []
        alpha = []
        rho = []
        v = []
        self.CL = []
github mdolab / OpenAeroStruct / plot_lift_twist.py View on Github external
from __future__ import division
import sqlitedict
import numpy
import matplotlib.pyplot as plt


def _get_lengths(self, A, B, axis):
    return numpy.sqrt(numpy.sum((B - A)**2, axis=axis))

db = sqlitedict.SqliteDict('aerostruct.db', 'openmdao')

twist = []
mesh = []
sec_forces = []
normals = []
cos_dih = []
lift = []

for case_name, case_data in db.iteritems():
    if "metadata" in case_name or "derivs" in case_name:
        continue # don't plot these cases
    n = case_data['Unknowns']['mesh'].shape[1]

    # only grab one half of the wing
    n21 = n/2
    sec_forces.append(case_data['Unknowns']['sec_forces'][n21:, :])
github RaRe-Technologies / sqlitedict / sqlitedict.py View on Github external
logger.exception("failed to delete %s" % (self.filename))

    def __del__(self):
        # like close(), but assume globals are gone by now (do not log!)
        try:
            self.close(do_log=False, force=True)
        except Exception:
            # prevent error log flood in case of multiple SqliteDicts
            # closed after connection lost (exceptions are always ignored
            # in __del__ method.
            pass

# Adding extra methods for python 2 compatibility (at import time)
if major_version == 2:
    SqliteDict.__nonzero__ = SqliteDict.__bool__
    del SqliteDict.__bool__  # not needed and confusing
#endclass SqliteDict


class SqliteMultithread(Thread):
    """
    Wrap sqlite connection in a way that allows concurrent requests from multiple threads.

    This is done by internally queueing the requests and processing them sequentially
    in a separate thread (in the same order they arrived).

    """
    def __init__(self, filename, autocommit, journal_mode):
        super(SqliteMultithread, self).__init__()
        self.filename = filename
        self.autocommit = autocommit
        self.journal_mode = journal_mode
github mdolab / OpenAeroStruct / assignment / plot_all.py View on Github external
def load_db(self):
        self.db = sqlitedict.SqliteDict(self.db_name, 'iterations')
        self.twist = []
        self.mesh = []
        self.def_mesh = []
        self.r = []
        self.thickness = []
        sec_forces = []
        normals = []
        widths = []
        self.lift = []
        self.lift_ell = []
        self.vonmises = []
        alpha = []
        rho = []
        v = []
        self.obj = []
github evertonstz / pynps / pynps / functions / functions.py View on Github external
def insert_into_DB(tsv, DB, type):
        with open(tsv, 'r', encoding="utf-8") as file:
            # read source tsv file
            file = [i for i in DictReader(file, delimiter='\t')]

            # write ordered dicsts to new db
        # opens db
        with SqliteDict(DB, autocommit=False) as database:
            #checks for console and make a [] in case it doesn't exist
            if system not in database:
                database[system] = []
            system_database = database[system]
            # if next((item for item in file if item['Title ID'] == "Tom" and item["age"] == 11), None) is not None:
            
            for index_file, i in enumerate(file):
                
                print(f"Processing {type}: {progress_bar( int(index_file/(len(file) - 1) * 100) )}", 
                                            f"({index_file}/{len(file) - 1})", 
                                            end="\r")
                
                i["Type"] = type.upper()
                i['System'] = system
                # check if keys part of the dict are already in the database 'Title ID' 'Region' 'Type' 'System'
                try:

sqlitedict

Persistent dict in Python, backed up by sqlite3 and pickle, multithread-safe.

Apache-2.0
Latest version published 1 year ago

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