How to use the refinem.bin_comparer.BinComparer function in refinem

"""Bin compare command"""

        check_dir_exists(options.genome_nt_dir1)
        check_dir_exists(options.genome_nt_dir2)

        genomes_files1 = self._genome_files(options.genome_nt_dir1, options.genome_ext1)
        if not self._check_nuclotide_seqs(genomes_files1):
            self.logger.warning('All files must contain nucleotide sequences.')
            sys.exit()

        genomes_files2 = self._genome_files(options.genome_nt_dir2, options.genome_ext2)
        if not self._check_nuclotide_seqs(genomes_files2):
            self.logger.warning('All files must contain nucleotide sequences.')
            sys.exit()

        bin_comparer = BinComparer()
        bin_comparer.run(genomes_files1, genomes_files2, options.scaffold_file, options.output_file)

        self.logger.info('Detailed bin comparison written to: ' + options.output_file)