worms

Protein Origami via Genetic Fusions

• Free software: Apache Software License 2.0
• Documentation: .

Features

please send angry emails to until there are docs here.

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.24 (2018-04-25) ------------------

• change two-stage xindex thershold multiplier for 1st stage from 1.25 to 2.0

0.1.23 (2018-04-24) ------------------

• add initial draft of Una's criteria for P213 xtal

0.1.22 (2018-04-20) ------------------

• add initial draft of Una's criteria for P3, P4 and P6 layers

0.1.21 (2018-04-19) ------------------

• peace sign heterotrimer site compatibility bug fix
• xindex search now stores lists instead of one-per-bin

0.1.20 (2018-04-16) ------------------

• add more dihedral sym files

0.1.19 (2018-04-6)

• minor performance impovements in hash-index based search

0.1.17 (2018-04-4)

• hash-index based search for Cyclic(..., origin_seg=...)

0.1.16 (2018-03-15) ------------------

• I52 symmetry bug fix

0.1.15 (2018-03.05) ------------------

• add NullCriteria that always returns 0 err

0.1.14 (2018-02-28) ------------------

• fix provenance bug in 'cyclic entry' cases
• try to make serialization of Segments more efficient

0.1.13 (2018-02-16) ------------------

• raise exception if system too large

0.1.12 (2018-02-16) ------------------

• partial bignum fix

0.1.11 (2018-02-15) ------------------

• fix memory bug
• make distribution work better
• maybe fix pose bug, still some logic err, but maybe ok

0.1.10 (2018-02-15) ------------------

• add max_results option to grow
• fix C2 sym bug
• fix xform axis cen bug
• fix memory "bug" with batch parallel processing

0.1.9 (2018-02-08)

• add max_samples option to grow

0.1.8 (2018-02-07)

• origin_seg bug fix

0.1.6 (2018-02-01)

• middle-to-end cyclic fusions working
• add pretty logo of mid-to-end C3 fusion

0.1.6 (2018-02-01)

• bug fix in fullatom option

0.1.5 (2018-02-01)

• add fullatom option to Worms.sympose
• cyclic premutation working for simple beginning-to-end case

0.1.4 (2018-02-01)

• pypi deplolment derp

0.1.3 (2018-02-01)

• pypi deplolment derp

0.1.2 (2018-01-23)

• Add __main__ for module to run tests
• move worms.pdb to worms.data because pdb is kinda reserved
• move utility stuff to util.py
• add some interactive visualization utils for debugging

0.1.1 (2018-01-23)

• First release on PyPI.