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def copy(self, id=None, tag=None, depends=True):
"""@API
Like `proc`'s `copy` function, copy a procset.
Each processes will be copied.
@params:
id (str): Use a different id if you don't
want to use the variant name
tag (str): The new tag of all copied processes
depends (bool): Whether to copy the dependencies or not.
Default: True
- dependences for processes in starts will not be copied
@returns:
(ProcSet): The new procset
"""
id = id or varname()
ret = self.__class__(*self.procs.values(),
id=id,
tag=tag,
copy=True,
depends=False)
if depends:
for proc in ret.procs.values():
proc.depends = [
ret.procs[dep.id] if dep is self.procs[dep.id] else dep
for dep in self.procs[proc.id].depends
]
ret.starts.add(Proxy(ret.procs[proc.id] for proc in self.starts))
ret.ends.add(Proxy(ret.procs[proc.id] for proc in self.ends))
def __init__(self, *procs, id=None, tag=None, copy=True, depends=True):
"""@API
Constructor
@params:
*procs (Proc) : the set of processes
**kwargs: Other arguments to instantiate a `ProcSet`
depends (bool): Whether auto deduce depends.
Default: `True`
id (str): The id of the procset.
Default: `None` (the variable name)
tag (str): The tag of the processes. Default: `None`
copy (bool): Whether copy the processes or just use them.
Default: `True`
"""
self.__dict__['id'] = id or varname()
self.__dict__['tag'] = tag
self.__dict__['starts'] = Proxy()
self.__dict__['ends'] = Proxy()
self.__dict__['delegates'] = OrderedDiot(diot_nest=False)
self.__dict__['procs'] = OrderedDiot(diot_nest=False)
self.__dict__['modules'] = Diot(diot_nest=False)
# save initial states before a module is called
# states will be resumed before each module is called
self.__dict__['initials'] = Diot(diot_nest=False)
prevproc = None
for proc in procs:
assert hasattr(proc, 'id') and hasattr(proc, 'tag'), (
'Argument has to be a Proc object: %r.' % proc
)
if copy:
def copy(self, id=None, **kwargs): # pylint: disable=redefined-builtin, invalid-name
"""@API
Copy a process to a new one
Depends and nexts will be copied
@params:
id: The id of the new process
kwargs: Other arguments for constructing a process
"""
newid = id or varname()
raw_attrs = {key: try_deepcopy(value)
for key, value in self.__attrs_property_raw__.items()
if key not in ('input', 'id', 'channel', 'jobs',
'runtime_config', 'depends', 'nexts')}
# attr.ib not in __attrs_property_raw__
raw_attrs.update({
# only keep the keys of input
'input': (','.join(self._input)
if isinstance(self._input, list)
else ','.join(self._input.keys())
if isinstance(self._input, dict)
else self._input),
'desc': self.desc,
'envs': try_deepcopy(self.envs),
'nthread': self.nthread,
})
default=attr.Factory(lambda: varname(caller=2)),
repr=False,