View tsinfer on Snyk Open Source Advisor

Package Health Score

73 / 100

security
No known security issues
popularity
Limited
maintenance
Healthy
community
Active

Popularity

Limited

GitHub Stars: 56
Forks: 13
Contributors: 20

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package tsinfer, we found that it has been starred 56 times.

Security

No known security issues

Security and license risk for latest version

Release Date: Jul 17, 2024
Direct Vulnerabilities: 0
C
0
H
0
M
0
L
Indirect Vulnerabilities: 0
C
0
H
0
M
0
L
License Risk: 0
H
0
M
0
L

All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

GPL-3.0

Non-Permissive License

We noticed that this project uses a license which requires less permissive conditions such as disclosing the source code, stating changes or redistributing the source under the same license. It is advised to further consult the license terms before use.

Security Policy

We found a way for you to contribute to the project! Looks like tsinfer is missing a security policy.

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Maintenance

Healthy

Commit Frequency

Open Issues: 120
Open PR: 6
Last Release: 4 months ago
Last Commit: 2 months ago

Further analysis of the maintenance status of tsinfer based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Healthy.

We found that tsinfer demonstrates a positive version release cadence with at least one new version released in the past 12 months.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Active

Readme: Yes
Contributing.md: No
Code of Conduct: Yes
Contributors: 20
Funding: No

With more than 10 contributors for the tsinfer repository, this is possibly a sign for a growing and inviting community.

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Package

Python Versions Compatibility: >=3.9

Age: 7 years
Latest Release: 3 months ago
Dependencies: 5 Direct
Versions: 14
Maintainers: 2
Wheels: Linux, macOS, Windows

Not sure how to use tsinfer?

To help you get started, we've collected the most common ways that tsinfer is being used within popular public projects.

tskit-dev / tsinfer / tests / test_formats.py View on Github

def test_provenance(self):
        sample_data, ancestors = self.get_example_data(10, 10, 40)
        ancestor_data = tsinfer.AncestorData(sample_data)
        self.verify_data_round_trip(sample_data, ancestor_data, ancestors)
        self.assertEqual(ancestor_data.num_provenances, sample_data.num_provenances + 1)

        timestamp = ancestor_data.provenances_timestamp[-1]
        iso = datetime.datetime.now().isoformat()
        self.assertEqual(timestamp.split("T")[0], iso.split("T")[0])
        record = ancestor_data.provenances_record[-1]
        self.assertEqual(record["software"]["name"], "tsinfer")
        a = list(ancestor_data.provenances())
        self.assertEqual(a[-1][0], timestamp)
        self.assertEqual(a[-1][1], record)
        for j, (timestamp, record) in enumerate(sample_data.provenances()):
            self.assertEqual(timestamp, a[j][0])
            self.assertEqual(record, a[j][1])

View more ways to use tsinfer

tsinfer dependencies

daiquiri humanize lmdb sortedcontainers tqdm

FAQs

What is tsinfer?

Infer tree sequences from genetic variation data. Visit Snyk Advisor to see a full health score report for tsinfer, including popularity, security, maintenance & community analysis.

Is tsinfer popular?

The python package tsinfer receives a total of 323 weekly downloads. As such, tsinfer popularity was classified as limited. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is tsinfer well maintained?

We found that tsinfer demonstrated a healthy version release cadence and project activity. It has a community of 20 open source contributors collaborating on the project. See the full package health analysis to learn more about the package maintenance status.

Is tsinfer safe to use?

The python package tsinfer was scanned for known vulnerabilities and missing license, and no issues were found. Thus the package was deemed as safe to use. See the full health analysis review.

Last updated on 20 November-2024, at 23:47 (UTC).

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tsinfer

Infer tree sequences from genetic variation data. For more information about how to use this package see README

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Package Health Score

Popularity

Direct Usage Popularity

Security

Security and license risk for latest version

Non-Permissive License

Maintenance

Commit Frequency

Community

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Package

Not sure how to use tsinfer?

tsinfer

tsinfer dependencies

FAQs

What is tsinfer?

Is tsinfer popular?

Is tsinfer well maintained?

Is tsinfer safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Fix identified vulnerabilities

Monitor for new issues

Package Health Score

Direct Usage Popularity

Security and license risk for latest version

Commit Frequency

Embed Package Health Score Badge

Keep your project healthy

Check your requirements.txt

Snyk Vulnerability Scanner

Not sure how to use tsinfer?

tsinfer

tsinfer dependencies

FAQs

What is tsinfer?

Is tsinfer popular?

Is tsinfer well maintained?

Is tsinfer safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Source Code

Open Source

Container

Config

Fix identified vulnerabilities

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