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How to use the stardist.lib.stardist3d.c_star_dist3d function in stardist

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github mpicbg-csbd / stardist / stardist / geometry / geom3d.py View on Github external
def _cpp_star_dist3D(lbl, rays, grid=(1,1,1)):
    dz, dy, dx = rays.vertices.T
    grid = _normalize_grid(grid,3)

    return c_star_dist3d(lbl.astype(np.uint16, copy=False),
                         dz.astype(np.float32, copy=False),
                         dy.astype(np.float32, copy=False),
                         dx.astype(np.float32, copy=False),
                         int(len(rays)), *tuple(int(a) for a in grid))

stardist

StarDist - Object Detection with Star-convex Shapes

GitHub
BSD-3-Clause
Latest version published 8 months ago

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63 / 100
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