sgm-data

v0.5.0b0

Module for loading, interpolating and plotting data taken at the SGM Beamline at the Canadian Light Source. For more information about how to use this package see README

Latest version published 2 years ago

License: Apache-2.0

PyPI

GitHub

Package Health Score

51 / 100

security
Security review needed
popularity
Limited
maintenance
Inactive
community
Active

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Popularity

Limited

GitHub Stars: 128
Forks: 53
Contributors: 30

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package sgm-data, we found that it has been starred 128 times.

Security

Security review needed

Security and license risk for latest version

Release Date: Apr 5, 2023
Direct Vulnerabilities: 0
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0
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Indirect Vulnerabilities: 0
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License Risk: 0
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All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

Apache-2.0

Security Policy

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Maintenance

Inactive

Commit Frequency

Open Issues: 29
Open PR: 0
Last Release: 2 years ago
Last Commit: 1 month ago

Further analysis of the maintenance status of sgm-data based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Inactive.

An important project maintenance signal to consider for sgm-data is that it hasn't seen any new versions released to PyPI in the past 12 months, and could be considered as a discontinued project, or that which receives low attention from its maintainers.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Active

Readme: Yes
Contributing.md: No
Code of Conduct: Yes
Contributors: 30
Funding: No

With more than 10 contributors for the sgm-data repository, this is possibly a sign for a growing and inviting community.

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Package

Python Versions Compatibility: ==3.7.*

Age: 5 years
Latest Release: 2 years ago
Dependencies: 14 Direct / 45 Total
Versions: 17
Maintainers: 1
Wheels: OS Independent

Readme

Helper module for working with data from the SGM Beamline

Installation:

Using pip:

pip install sgm-data

or from source:

git clone https://github.lightsource.ca/arthurz/sgmdata ./sgmdata
cd sgmdata
python setup.py install

Usage:

First import the package, and select data to load in.

import sgmdata 
data = sgmdata.SGMData(["file1.hdf5", "file2.hdf5", "..."])

This will identify the independent axis, signals and other data within the files listed. The file load list also works with hsds domains.

data = sgmdata.SGMData(["file1.data.sgm-hdf5.lightsource.ca", "..."])

Useful functions:

data.scans  #contains a dictionary of the identified data arrays loaded from your file list
data.interpolate(start=270, stop=2000, resolution=0.5) #bin the data in scans dictionary and interpolates missing points
data.mean() #average data with the same sample name, and spec command together.

Working with individual scans:

df = data.scans['FilePrefix'].entry1.interpolate(start=270, stop=2000, resolution=0.1) #bin data for a single scan.
df2 = data.scans['FilePrefix'].entry1.fit_mcas() #perform batch gaussian fitting of interpolated SDD signal

Plotting (with Bokeh):

data.scans['FilePrefix'].entry1.plot()
data.average.plot()

sgm-data dependencies

beautifulsoup4 blosc bokeh h5py lmfit lz4 matplotlib msgpack numpy pandas python-slugify requests scipy tqdm

FAQs

What is sgm-data?

Module for loading, interpolating and plotting data taken at the SGM Beamline at the Canadian Light Source. Visit Snyk Advisor to see a full health score report for sgm-data, including popularity, security, maintenance & community analysis.

Is sgm-data popular?

The python package sgm-data receives a total of 116 weekly downloads. As such, sgm-data popularity was classified as limited. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is sgm-data well maintained?

We found indications that sgm-data is an Inactive project. See the full package health analysis to learn more about the package maintenance status.

Is sgm-data safe to use?

While scanning the latest version of sgm-data, we found that a security review is needed. A total of 0 vulnerabilities or license issues were detected. See the full security scan results.

Last updated on 4 November-2024, at 19:39 (UTC).

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