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def jumped_state(bit_generator, n_streams=2, entropy=None):
bitgen = getattr(rg, bit_generator)
config = CONFIG[bitgen]
seed = config["seed"]
if entropy is None:
entropy = rg.random_entropy(seed // 32)
if config["seed_size"] == 64:
entropy = entropy.view(np.uint64)
if config["seed"] == 64:
entropy = entropy[0]
elif config["seed_size"] == 128:
entropy = int(entropy[0]) + int(entropy[1]) * 2 ** 64
elif config["seed_size"] == 256:
base = int(0)
for i in range(4):
base += int(entropy[i]) * (2 ** (64 * i))
entropy = base
elif config["seed_size"] != 32:
raise NotImplementedError
else:
seed_size = config["seed_size"]
if seed_size in (32, 64):
BUFFER_SIZE = 256 * 2 ** 20
DESCRIPTION = """
A driver that simplifies testing bit generators using PractRand.
"""
CONFIG = {
rg.PCG32: {"output": 32, "seed": 64, "seed_size": 64},
rg.PCG64: {"output": 64, "seed": 128, "seed_size": 128},
rg.ThreeFry: {"output": 64, "seed": 256, "seed_size": 64},
rg.Xoshiro256: {"output": 64, "seed": 256, "seed_size": 64},
rg.Philox: {"output": 64, "seed": 256, "seed_size": 64},
rg.SFMT: {"output": 64, "seed": 128, "seed_size": 32},
rg.LXM: {"output": 64, "seed": 128, "seed_size": 32},
rg.SFC64: {"output": 64, "seed": 128, "seed_size": 32},
rg.AESCounter: {"output": 64, "seed": 128, "seed_size": 32},
}
def reorder_bytes(a):
dtype = a.dtype
assert dtype in (np.uint32, np.uint64)
cols = 8 if dtype == np.uint64 else 4
a = a.view(np.uint8).reshape((-1, cols))
return a.ravel("F").view(dtype)
def pack_bits(a, bits):
print("Packing bits")
assert bits > 32
nitems = a.shape[0]
block_rows = nitems // 64
def test_randomfunc_parallel_pcg64():
mesh = UnitSquareMesh(10, 10)
V0 = VectorFunctionSpace(mesh, "CG", 1)
V1 = FunctionSpace(mesh, "CG", 1)
V = V0 * V1
seed = 123456789
# original
from mpi4py import MPI
rg_base = randomgen.PCG64(seed=seed, inc=MPI.COMM_WORLD.rank).generator
# Firedrake wrapper
rg_wrap = PCG64(seed=seed).generator
for i in range(1, 10):
f = rg_wrap.beta(V, 0.3, 0.5)
with f.dat.vec_ro as v:
assert np.allclose(rg_base.beta(0.3, 0.5, size=(v.local_size,)), v.array[:])
rg_base.seed(seed=12345678910, inc=MPI.COMM_WORLD.rank)
rg_wrap.seed(seed=12345678910)
for i in range(1, 10):
f = rg_wrap.beta(V, 0.3, 0.5)
with f.dat.vec_ro as v:
assert np.allclose(rg_base.beta(0.3, 0.5, size=(v.local_size,)), v.array[:])
def configure_stream(
bit_gen, kwargs=None, jumped=False, streams=8196, entropy=DEFAULT_ENTOPY
):
bit_generator = bit_gen.__name__
extra_code = extra_initialization = ""
if bit_gen == SFC64 and kwargs["k"] == "weyl":
extra_code = f"""\
base = rg.SFC64(seed_seq)
weyl = base.weyl_increments({streams})
bitgens = [rg.SFC64(seed_seq, k=k) for k in retain]
"""
elif bit_gen == DSFMT:
bit_generator = "Wrapper32"
extra_initialization = DSFMT_WRAPPER
# return configure_dsfmt(streams, entropy=entropy)
kwargs = {} if kwargs is None else kwargs
kwargs_repr = str(kwargs)
return TEMPLATE.render(
bit_generator=bit_generator,
entropy=entropy,
jumped=jumped,
streams=streams,
kwargs=kwargs_repr,
output=OUTPUT[bit_gen],
extra_initialization=extra_initialization,
extra_code=extra_code,
)
args = [value for value in config.values()]
for arg_set in itertools.product(*args):
kwargs = {key: arg for key, arg in zip(config.keys(), arg_set)}
key = "-".join(
[bit_generator]
+ [f"{key}-{value}" for key, value in kwargs.items()]
)
parameters[key] = (bitgen, kwargs)
else:
parameters[key] = (bitgen, {})
for key in parameters:
extra_initialization = ""
bitgen, kwargs = parameters[key]
bit_generator = bitgen.__name__
kwargs_repr = repr(kwargs)
if bitgen == DSFMT:
extra_initialization = DSFMT_WRAPPER
bit_generator = "Wrapper32"
streams[key] = TEMPLATE.render(
streams=num_streams,
kwargs=kwargs_repr,
bit_generator=bit_generator,
output=OUTPUT[bitgen],
extra_initialization=extra_initialization,
sequential=sequential,
)
return streams
def configure_stream(
bit_gen, kwargs=None, jumped=False, streams=8196, entropy=DEFAULT_ENTOPY
):
bit_generator = bit_gen.__name__
extra_code = extra_initialization = ""
if bit_gen == SFC64 and kwargs["k"] == "weyl":
extra_code = f"""\
base = rg.SFC64(seed_seq)
weyl = base.weyl_increments({streams})
bitgens = [rg.SFC64(seed_seq, k=k) for k in retain]
"""
elif bit_gen == DSFMT:
bit_generator = "Wrapper32"
extra_initialization = DSFMT_WRAPPER
# return configure_dsfmt(streams, entropy=entropy)
kwargs = {} if kwargs is None else kwargs
kwargs_repr = str(kwargs)
return TEMPLATE.render(
bit_generator=bit_generator,
entropy=entropy,
jumped=jumped,
streams=streams,
import datetime as dt
import numba as nb
import numpy as np
from randomgen import Xoroshiro128
x = Xoroshiro128()
f = x.ctypes.next_uint32
s = x.ctypes.state
@nb.jit(nopython=True)
def bounded_uint(lb, ub, state):
mask = delta = ub - lb
mask |= mask >> 1
mask |= mask >> 2
mask |= mask >> 4
mask |= mask >> 8
mask |= mask >> 16
val = f(state) & mask
while val > delta:
val = f(state) & mask
import datetime as dt
import numba as nb
import numpy as np
from randomgen import Xoroshiro128
x = Xoroshiro128()
f = x.ctypes.next_uint32
s = x.ctypes.state
@nb.jit(nopython=True)
def bounded_uint(lb, ub, state):
mask = delta = ub - lb
mask |= mask >> 1
mask |= mask >> 2
mask |= mask >> 4
mask |= mask >> 8
mask |= mask >> 16
val = f(state) & mask
while val > delta:
val = f(state) & mask
from randomgen import Xoroshiro128
ffi = FFI()
if os.path.exists("./distributions.dll"):
lib = ffi.dlopen("./distributions.dll")
elif os.path.exists("./libdistributions.so"):
lib = ffi.dlopen("./libdistributions.so")
else:
raise RuntimeError("Required DLL/so file was not found.")
ffi.cdef(
"""
double random_gauss_zig(void *bitgen_state);
"""
)
x = Xoroshiro128()
xffi = x.cffi
bit_generator = xffi.bit_generator
random_gauss_zig = lib.random_gauss_zig
def normals(n, bit_generator):
out = np.empty(n)
for i in range(n):
out[i] = random_gauss_zig(bit_generator)
return out
normalsj = nb.jit(normals, nopython=True)
# Numba requires a memory address for void *
import randomgen
# -- Project information -----------------------------------------------------
project = 'RandomGen'
copyright = '2018, Kevin Sheppard'
author = 'Kevin Sheppard'
# The short X.Y version.
version = randomgen.__version__
if '+' in version:
version = version.split('+')
version = ''.join((version[0], ' (+', version[1].split('.')[0], ')'))
# The full version, including alpha/beta/rc tags.
release = randomgen.__version__
# -- General configuration ---------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.napoleon',
'sphinx.ext.autodoc',
'sphinx.ext.extlinks',
'sphinx.ext.todo',
'sphinx.ext.doctest',