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How to use the pyteomics.auxiliary.OffsetIndex function in pyteomics

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github mobiusklein / ms_deisotope / ms_deisotope / data_source / mgf.py View on Github external
def _create_parser(self):
        if self._use_index:
            return _MGFParser(self.source_file, read_charges=False,
                              convert_arrays=1, encoding=self.encoding)
        simple_reader = mgf.MGF(
            self.source_file, read_charges=False,
            convert_arrays=1, encoding=self.encoding)
        simple_reader.index = OffsetIndex()
        return simple_reader

pyteomics

A framework for proteomics data analysis.

GitHub
Apache-2.0
Latest version published 13 days ago

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78 / 100
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