pydra-dcm2niix

v1.2.1

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter For more information about how to use this package see README

Latest version published 1 year ago

License: Apache-2.0

PyPI

GitHub

Package Health Score

56 / 100

security
Security review needed
popularity
Small
maintenance
Inactive
community
Sustainable

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Popularity

Small

GitHub Stars: 879
Forks: 228
Contributors: 40

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package pydra-dcm2niix, we found that it has been starred 879 times.

Security

Security review needed

Security and license risk for latest version

Release Date: Jul 11, 2023
Direct Vulnerabilities: 0
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0
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0
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0
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Indirect Vulnerabilities: 0
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0
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0
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License Risk: 0
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1
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All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

Apache-2.0

Security Policy

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Maintenance

Inactive

Commit Frequency

Open Issues: 4
Open PR: 0
Last Release: 1 year ago
Last Commit: 4 months ago

Further analysis of the maintenance status of pydra-dcm2niix based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Inactive.

An important project maintenance signal to consider for pydra-dcm2niix is that it hasn't seen any new versions released to PyPI in the past 12 months, and could be considered as a discontinued project, or that which receives low attention from its maintainers.

In the past month we didn't find any pull request activity or change in issues status has been detected for the GitHub repository.

Community

Sustainable

Readme: Yes
Contributing.md: No
Code of Conduct: No
Contributors: 40
Funding: No

With more than 10 contributors for the pydra-dcm2niix repository, this is possibly a sign for a growing and inviting community.

We found a way for you to contribute to the project! Looks like pydra-dcm2niix is missing a Code of Conduct.

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Package

Python Versions Compatibility: >=3.7

Age: 3 years
Latest Release: 1 year ago
Dependencies: 1 Direct / 15 Total
Versions: 6
Maintainers: 2
Wheels: OS Independent

Readme

Pydra Dcm2Niix Task

This repository contains Pydra task interface for the dcm2niix DICOM to NIfTI converter tool (https://github.com/rordenlab/dcm2niix).

Part of this effort is to establish a (mostly) declarative language for describing tasks that potentially have intricate rules for determining the availability and names from the choice of inputs.

Installation

pip install /path/to/pydra-dcm2niix/

Installation for developers

pip install -e /path/to/pydra-dcm2niix/[dev]

Basic Use

To run the dcm2niix task

from pydra.tasks.dcm2niix import Dcm2Niix

task = Dcm2Niix(in_dir='/path/to/dicom/dir', out_dir='/path/to/create/nifti/output')
result = task()

However, the converter task interface will typically be used as the first step within larger Pydra workflows

from pydra import Workflow
from pydra.tasks.dcm2niix import Dcm2Niix

my_workflow = Workflow(name='my_workflow', input_spec=['in_dicom'])

my_workflow.add(
    Dcm2Niix(name='converter', in_dir=my_workflow.lzin.in_dicom, out_dir='.'))
my_workflow.add(...)

my_workflow()

pydra-dcm2niix dependencies

pydra

FAQs

What is pydra-dcm2niix?

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter. Visit Snyk Advisor to see a full health score report for pydra-dcm2niix, including popularity, security, maintenance & community analysis.

Is pydra-dcm2niix popular?

The python package pydra-dcm2niix receives a total of 605 weekly downloads. As such, pydra-dcm2niix popularity was classified as small. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is pydra-dcm2niix well maintained?

We found indications that pydra-dcm2niix is an Inactive project. See the full package health analysis to learn more about the package maintenance status.

Is pydra-dcm2niix safe to use?

While scanning the latest version of pydra-dcm2niix, we found that a security review is needed. A total of 0 vulnerabilities or license issues were detected. See the full security scan results.

Last updated on 20 November-2024, at 22:05 (UTC).

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