Package Health Score

63 / 100

security
Security review needed
popularity
Limited
maintenance
Sustainable
community
Sustainable

Popularity

Limited

GitHub Stars: 31
Forks: 21
Contributors: 20

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package napari-ome-zarr, we found that it has been starred 31 times.

Security

Security review needed

Security and license risk for latest version

Release Date: Jul 15, 2024
Direct Vulnerabilities: 0
C
0
H
0
M
0
L
Indirect Vulnerabilities: 0
C
0
H
0
M
0
L
License Risk: 0
H
3
M
0
L

All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

BSD-3-Clause

Security Policy

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Maintenance

Sustainable

Commit Frequency

Open Issues: 22
Open PR: 7
Last Release: 5 months ago
Last Commit: 1 month ago

Further analysis of the maintenance status of napari-ome-zarr based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Sustainable.

We found that napari-ome-zarr demonstrates a positive version release cadence with at least one new version released in the past 12 months.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Sustainable

Readme: Yes
Contributing.md: No
Code of Conduct: Yes
Contributors: 20
Funding: No

With more than 10 contributors for the napari-ome-zarr repository, this is possibly a sign for a growing and inviting community.

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Package

Python Versions Compatibility: >=3.7

Age: 4 years
Latest Release: 5 months ago
Dependencies: 2 Direct / 120 Total
Versions: 13
Maintainers: 0
Wheels: OS Independent

Readme

napari-ome-zarr

A reader for zarr backed OME-NGFF images.

This napari plugin was generated with Cookiecutter using with @napari's cookiecutter-napari-plugin template.

Installation

Install napari if not already installed.

You can install napari-ome-zarr via pip. Activate the same environment as you installed napari into, then:

pip install napari-ome-zarr

Usage

Napari will use napari-ome-zarr plugin to open images that the plugin recognises as ome-zarr. The image metadata from OMERO will be used to set channel names and rendering settings in napari::

napari "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.3/9836842.zarr/"

If a dialog in napari pops up, encouraging you to choose a reader, choose napari-ome-zarr and click OK. You can stop it happening with addition of --plugin napari-ome-zarr as in the example below.

To open a local file::

napari --plugin napari-ome-zarr 13457227.zarr

OR in python::

import napari

viewer = napari.Viewer()
viewer.open("https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0101A/13457537.zarr", plugin="napari-ome-zarr")

napari.run()

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-ome-zarr" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

napari-ome-zarr dependencies

numpy vispy

FAQs

What is napari-ome-zarr?

A reader for zarr backed OME-NGFF images. Visit Snyk Advisor to see a full health score report for napari-ome-zarr, including popularity, security, maintenance & community analysis.

Is napari-ome-zarr popular?

The python package napari-ome-zarr receives a total of 728 weekly downloads. As such, napari-ome-zarr popularity was classified as limited. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is napari-ome-zarr well maintained?

We found indications that napari-ome-zarr maintenance is sustainable demonstrating some project activity. We saw a total of 20 open source contributors collaborating on the project. See the full package health analysis to learn more about the package maintenance status.

Is napari-ome-zarr safe to use?

While scanning the latest version of napari-ome-zarr, we found that a security review is needed. A total of 0 vulnerabilities or license issues were detected. See the full security scan results.

Last updated on 25 December-2024, at 11:31 (UTC).

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napari-ome-zarr

A reader for zarr backed OME-NGFF images. For more information about how to use this package see README

Ensure you're using the healthiest python packages

Package Health Score

Popularity

Direct Usage Popularity

Security

Security and license risk for latest version

Maintenance

Commit Frequency

Community

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Package

Readme

napari-ome-zarr

Installation

Usage

Contributing

License

Issues

napari-ome-zarr dependencies

FAQs

What is napari-ome-zarr?

Is napari-ome-zarr popular?

Is napari-ome-zarr well maintained?

Is napari-ome-zarr safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Fix identified vulnerabilities

Monitor for new issues

Package Health Score

Direct Usage Popularity

Security and license risk for latest version

Commit Frequency

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Readme

napari-ome-zarr

Installation

Usage

Contributing

License

Issues

napari-ome-zarr dependencies

FAQs

What is napari-ome-zarr?

Is napari-ome-zarr popular?

Is napari-ome-zarr well maintained?

Is napari-ome-zarr safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Source Code

Open Source

Container

Config

Fix identified vulnerabilities

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