Package Health Score

53 / 100

security
No known security issues
popularity
Limited
maintenance
Inactive
community
Limited

Popularity

Limited

GitHub Stars: 0
Forks: 1
Contributors: 3

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package dvidtools, we found that it has been starred ? times.

Security

No known security issues

Security and license risk for latest version

Release Date: May 14, 2024
Direct Vulnerabilities: 0
C
0
H
0
M
0
L
Indirect Vulnerabilities: 0
C
0
H
0
M
0
L
License Risk: 0
H
0
M
0
L

All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

GPL-3.0

Non-Permissive License

We noticed that this project uses a license which requires less permissive conditions such as disclosing the source code, stating changes or redistributing the source under the same license. It is advised to further consult the license terms before use.

Security Policy

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Maintenance

Inactive

Commit Frequency

Open Issues: 2
Open PR: 1
Last Release: 7 months ago
Last Commit: 17 days ago

Further analysis of the maintenance status of dvidtools based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Inactive.

We found that dvidtools demonstrates a positive version release cadence with at least one new version released in the past 12 months.

In the past month we didn't find any pull request activity or change in issues status has been detected for the GitHub repository.

Community

Limited

Readme: Yes
Contributing.md: No
Code of Conduct: No
Contributors: 3
Funding: No

This project has seen only 10 or less contributors.

We found a way for you to contribute to the project! Looks like dvidtools is missing a Code of Conduct.

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Package

Python Versions Compatibility: >=3.8

Age: 2 years
Latest Release: 7 months ago
Dependencies: 4 Direct
Versions: 2
Maintainers: 1
Wheels: OS Independent

Readme

dvidtools

Python tools to fetch data from DVID servers.

Find the documentation here.

Want to query a neuPrint server instead? Check out neuprint-python.

What can `dvidtools` do for you?

get/set user bookmarks
get/set neuron annotations (names)
download precomputed meshes, skeletons (SWCs) and ROIs
generate meshes or skeletons from scratch
get basic neuron info (# of voxels/synapses)
fetch synapses
fetch connectivity (adjacency matrix, connectivity table)
retrieve labels (TODO, to split, etc)
map positions to body IDs
detect potential open ends (based on a script by Stephen Plaza)

Install

Make sure you have Python 3 (3.8 or later), pip. Then run this:

pip3 install dvidtools

To install the dev version straight from Github:

pip3 install git+https://github.com/flyconnectome/dvid_tools@master

Optional dependencies

Necessary dependencies will be installed automatically.

If you plan to use the tip detector with classifier-derived confidence, you will also need sciki-learn:

pip3 install scikit-learn

For from-scratch skeletonization you need to install skeletor:

pip3 install skeletor

Examples

Please see the documentation for examples.

Testing

For testing you need to have two environment variables set: DVID_TEST_SERVER and DVID_TEST_NODE. These should point to a DVID server/node that contain the Janelia hemibrain dataset. Then run:

$ pytest -v

dvidtools dependencies

networkx requests scipy trimesh

FAQs

What is dvidtools?

Fetch data from DVID server. Visit Snyk Advisor to see a full health score report for dvidtools, including popularity, security, maintenance & community analysis.

Is dvidtools popular?

The python package dvidtools receives a total of 20 weekly downloads. As such, dvidtools popularity was classified as limited. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is dvidtools well maintained?

We found indications that dvidtools is an Inactive project. See the full package health analysis to learn more about the package maintenance status.

Is dvidtools safe to use?

The python package dvidtools was scanned for known vulnerabilities and missing license, and no issues were found. Thus the package was deemed as safe to use. See the full health analysis review.

Last updated on 25 November-2024, at 15:50 (UTC).

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dvidtools

Fetch data from DVID server For more information about how to use this package see README

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Package Health Score

Popularity

Direct Usage Popularity

Security

Security and license risk for latest version

Non-Permissive License

Maintenance

Commit Frequency

Community

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Package

Readme

dvidtools

What can `dvidtools` do for you?

Install

Optional dependencies

Examples

Testing

dvidtools dependencies

FAQs

What is dvidtools?

Is dvidtools popular?

Is dvidtools well maintained?

Is dvidtools safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Fix identified vulnerabilities

Monitor for new issues

Package Health Score

Direct Usage Popularity

Security and license risk for latest version

Commit Frequency

Embed Package Health Score Badge

Keep your project healthy

Check your requirements.txt

Snyk Vulnerability Scanner

Readme

dvidtools

What can dvidtools do for you?

Install

Optional dependencies

Examples

Testing

dvidtools dependencies

FAQs

What is dvidtools?

Is dvidtools popular?

Is dvidtools well maintained?

Is dvidtools safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Source Code

Open Source

Container

Config

Fix identified vulnerabilities

Monitor for new issues

What can `dvidtools` do for you?