clustergrammer

v1.19.5

This is a clustergram implemented in D3.js. I started from the example http://bost.ocks.org/mike/miserables/ and added the following features For more information about how to use this package see README

Latest version published 7 years ago

License: MIT

NPM

GitHub

Package Health Score

42 / 100

security
Security review needed
popularity
Limited
maintenance
Inactive
community
Sustainable

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Security

Security review needed

All security vulnerabilities belong to production dependencies of direct and indirect packages.

Security and license risk for significant versions

All Versions

Version				Vulnerabilities	License Risk
1.19.5	\|	03/2018	Popular	0 C 0 H 0 M 0 L	0 H 0 M 0 L
1.18.2	\|	08/2017		0 C 0 H 0 M 0 L	0 H 0 M 0 L
1.17.2	\|	06/2017		0 C 0 H 0 M 0 L	0 H 0 M 0 L
1.16.2	\|	06/2017		0 C 0 H 0 M 0 L	0 H 0 M 0 L
1.15.15	\|	04/2017		0 C 0 H 0 M 0 L	0 H 0 M 0 L

License

MIT

Security Policy

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Popularity

Limited

Weekly Downloads (7)

GitHub Stars: 230
Forks: 85
Contributors: 6

Direct Usage Popularity

The npm package clustergrammer receives a total of 7 downloads a week. As such, we scored clustergrammer popularity level to be Limited.

Based on project statistics from the GitHub repository for the npm package clustergrammer, we found that it has been starred 230 times.

Downloads are calculated as moving averages for a period of the last 12 months, excluding weekends and known missing data points.

Community

Sustainable

Readme.md: Yes
Contributing.md: No
Code of Conduct: Yes
Contributors: 6
Funding: No

This project has seen only 10 or less contributors.

Embed Package Health Score Badge

Maintenance

Inactive

Commit Frequency

No Recent Commits

Open Issues: 21
Open PR: 10
Last Release: 7 years ago
Last Commit: 4 years ago

Further analysis of the maintenance status of clustergrammer based on released npm versions cadence, the repository activity, and other data points determined that its maintenance is Inactive.

An important project maintenance signal to consider for clustergrammer is that it hasn't seen any new versions released to npm in the past 12 months, and could be considered as a discontinued project, or that which receives low attention from its maintainers.

In the past month we didn't find any pull request activity or change in issues status has been detected for the GitHub repository.

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Package

Node.js Compatibility: not defined

Age: 8 years
Dependencies: 11 Direct
Versions: 76
Install Size: 32.2 MB
Dist-tags: 1
# of Files: 281
Maintainers: 1
TS Typings: No

clustergrammer has more than a single and default latest tag published for the npm package. This means, there may be other tags available for this package, such as next to indicate future releases, or stable to indicate stable releases.

Readme

Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data. Click the screenshot below to view an interactive tutorial:

Clustergrammer's interacive features include:

Clustergrammer can be used in three main ways (this repo contains the source code for Clustergrammer-JS):

For information about building a webpage or app using Clustergrammer see: Web-Development with Clustergrammer

Using Clustergrammer

Pleae see Clustergramer's documentation for detailed information or select a specific topic below:

Citing Clustergrammer

Please consider supporting Clustergrammer by citing our publication:

Fernandez, N. F. et al. Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data. Sci. Data 4:170151 doi: 10.1038/sdata.2017.151 (2017).

Licensing

Clustergrammer was developed by the Ma'ayan lab at the Icahn School of Medicine at Mount Sinai for the BD2K-LINCS DCIC and the KMC-IDG. Clustergrammer's license and third-party licenses are in the LICENSES directory and more information can be found at Clustergrammer License.

Please contact us for support, licensing questions, comments, and suggestions.

clustergrammer dependencies

awesomplete cornhundred-clusterfck d3 extend jquery lodash mathjs save-svg-as-png style-loader tayden-clusterfck underscore

clustergrammer development dependencies

babel-core babel-eslint babel-loader babel-preset-es2015 browser-sync browser-sync-webpack-plugin css-loader eslint expose-loader less-loader object-assign webpack

FAQs

What is clustergrammer?

This is a clustergram implemented in D3.js. I started from the example http://bost.ocks.org/mike/miserables/ and added ... Visit Snyk Advisor to see a full health score report for clustergrammer, including popularity, security, maintenance & community analysis.

Is clustergrammer popular?

The npm package clustergrammer receives a total of 7 weekly downloads. As such, clustergrammer popularity was classified as limited. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is clustergrammer well maintained?

We found indications that clustergrammer is an Inactive project. See the full package health analysis to learn more about the package maintenance status.

Is clustergrammer safe to use?

While scanning the latest version of clustergrammer, we found that a security review is needed. A total of 0 vulnerabilities or license issues were detected. See the full security scan results.

Last updated on 15 November-2024, at 19:13 (UTC).

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